Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | N180_02120 | Not Available | Negative | 4076974 - 4077651 | 25978.9 |
| hypothetical protein | N180_02125 | Not Available | Negative | 4077648 - 4078964 | 48710.4 |
| tonb-dependent receptor | N180_02130 | Not Available | Positive | 4079090 - 4081459 | 88991.3 |
| hypothetical protein | N180_02135 | Not Available | Negative | 4082026 - 4082463 | 16631.2 |
| hypothetical protein | N180_02140 | Not Available | Negative | 4082575 - 4084959 | 90205.6 |
| hypothetical protein | N180_02145 | Not Available | Negative | 4084969 - 4086432 | 55414.6 |
| copy family transcriptional repressor | N180_02150 | Not Available | Negative | 4086435 - 4086797 | 13829.6 |
| membrane protein | N180_02155 | Not Available | Negative | 4086886 - 4087305 | 15436.8 |
| endoribonuclease l-psp | N180_02160 | Not Available | Negative | 4087636 - 4088025 | 14725.5 |
| crp/fnr family transcriptional regulator | N180_02165 | Not Available | Negative | 4088152 - 4088715 | 22044.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

