Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 4046142 - 4046218 | Not Available |
| hypothetical protein | N180_01970 | Not Available | Negative | 4046499 - 4046819 | 12206.9 |
| hypothetical protein | N180_01975 | Not Available | Positive | 4046998 - 4047843 | 29599.0 |
| short-chain dehydrogenase | N180_01980 | Not Available | Negative | 4047995 - 4048792 | 28172.7 |
| hxlr family transcriptional regulator | N180_01985 | Not Available | Positive | 4048923 - 4049282 | 13678.0 |
| hypothetical protein | N180_01990 | Not Available | Negative | 4049329 - 4050201 | 34312.6 |
| short-chain dehydrogenase | N180_01995 | Not Available | Negative | 4050444 - 4051271 | 30442.2 |
| hypothetical protein | N180_02000 | Not Available | Positive | 4051368 - 4051700 | 12436.0 |
| lyttr family two component transcriptional regulator | N180_02005 | Not Available | Negative | 4051810 - 4052514 | 26807.8 |
| hypothetical protein | N180_02010 | Not Available | Negative | 4052501 - 4053616 | 42443.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

