Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_01595 | Not Available | Negative | 3968496 - 3969371 | 33866.9 |
| hypothetical protein | N180_01600 | Not Available | Positive | 3969561 - 3970562 | 35937.0 |
| hypothetical protein | N180_01605 | Not Available | Positive | 3970610 - 3971182 | 20592.9 |
| rna polymerase subunit sigma-24 | N180_01610 | Not Available | Positive | 3971224 - 3971790 | 22337.2 |
| hypothetical protein | N180_01615 | Not Available | Positive | 3971790 - 3972773 | 36870.5 |
| hypothetical protein | N180_01620 | Not Available | Negative | 3972806 - 3974440 | 60353.6 |
| hypothetical protein | N180_01625 | Not Available | Negative | 3974542 - 3975588 | 38251.5 |
| thiamine biosynthesis protein thih | N180_01630 | Not Available | Negative | 3975609 - 3976721 | 42807.1 |
| thiazole synthase | N180_01635 | Not Available | Negative | 3976714 - 3977481 | 27295.2 |
| hypothetical protein | N180_01640 | Not Available | Negative | 3977490 - 3978140 | 23333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

