Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel transport complex protein, nikm subunit, transmembrane | N180_01440 | Not Available | Positive | 3938946 - 3939659 | 26174.0 |
| choloylglycine hydrolase | N180_01445 | Not Available | Negative | 3939750 - 3940790 | 38272.6 |
| hypothetical protein | N180_01450 | Not Available | Negative | 3941189 - 3943870 | 102248.0 |
| hypothetical protein | N180_01455 | Not Available | Negative | 3944136 - 3945122 | 36895.7 |
| hypothetical protein | N180_01460 | Not Available | Negative | 3945197 - 3945793 | 23050.1 |
| hypothetical protein | N180_01465 | Not Available | Negative | 3945908 - 3946501 | 22540.3 |
| hypothetical protein | N180_01470 | Not Available | Positive | 3946654 - 3946905 | 9413.93 |
| hypothetical protein | N180_01480 | Not Available | Positive | 3947641 - 3948012 | 13680.2 |
| hypothetical protein | N180_01485 | Not Available | Positive | 3947990 - 3948367 | 14317.4 |
| hypothetical protein | N180_01490 | Not Available | Negative | 3948368 - 3948901 | 20953.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

