Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | N180_01385 | Not Available | Positive | 3927828 - 3928187 | 13662.7 |
| short-chain dehydrogenase | N180_01390 | Not Available | Negative | 3928571 - 3929275 | 25067.0 |
| hypothetical protein | N180_01395 | Not Available | Negative | 3929288 - 3929668 | 14909.9 |
| hypothetical protein | N180_01400 | Not Available | Negative | 3929734 - 3930597 | 33342.4 |
| arac family transcriptional regulator | N180_01405 | Not Available | Negative | 3930587 - 3931462 | 33633.3 |
| oxidoreductase | N180_01410 | Not Available | Positive | 3931548 - 3932495 | 34668.6 |
| lipase | N180_01415 | Not Available | Positive | 3932507 - 3933466 | 36510.0 |
| nad(p)h dehydrogenase | N180_01420 | Not Available | Positive | 3933469 - 3934071 | 22677.2 |
| dna-binding protein | N180_01425 | Not Available | Negative | 3934144 - 3935136 | 37495.7 |
| tonb-dependent receptor | N180_01430 | Not Available | Positive | 3935248 - 3937626 | 89801.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

