Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase recr | N180_17110 | Not Available | Negative | 3915770 - 3916390 | 22732.6 |
| sodium:solute symporter | N180_17115 | Not Available | Positive | 3916473 - 3917951 | 54842.1 |
| hypothetical protein | N180_17120 | Not Available | Positive | 3917969 - 3918676 | 26669.2 |
| membrane protein | N180_17125 | Not Available | Negative | 3918702 - 3919292 | 21725.8 |
| recx family transcriptional regulator | N180_17135 | Not Available | Positive | 3921829 - 3922323 | 19117.2 |
| Trna-gly | Not Available | Not Available | Positive | 3922454 - 3922529 | Not Available |
| hypothetical protein | N180_01355 | Not Available | Negative | 3922632 - 3923039 | 15943.8 |
| hypothetical protein | N180_01360 | Not Available | Positive | 3923173 - 3924546 | 52110.7 |
| hypothetical protein | N180_01365 | Not Available | Positive | 3924539 - 3924991 | 17610.3 |
| toxin rele | N180_01380 | Not Available | Positive | 3927533 - 3927844 | 12121.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

