Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | N180_18325 | Not Available | Positive | 3865222 - 3865419 | 7294.89 |
| antitermination protein nusg | N180_18330 | Not Available | Positive | 3865428 - 3865970 | 20597.2 |
| 50s ribosomal protein l11 | N180_18335 | Not Available | Positive | 3866048 - 3866491 | 15522.9 |
| 50s ribosomal protein l1 | N180_18340 | Not Available | Positive | 3866515 - 3867213 | 24532.9 |
| 50s ribosomal protein l10 | N180_18345 | Not Available | Positive | 3867216 - 3867737 | 18760.7 |
| 50s ribosomal protein l7/l12 | N180_18350 | Not Available | Positive | 3867801 - 3868175 | 12865.5 |
| dna-directed rna polymerase subunit beta | N180_18355 | Not Available | Positive | 3868329 - 3872132 | 142352.0 |
| dna-directed rna polymerase subunit beta' | N180_18360 | Not Available | Positive | 3872216 - 3876508 | 159874.0 |
| hypothetical protein | N180_18365 | Not Available | Positive | 3876630 - 3876944 | 11594.9 |
| trna delta(2)-isopentenylpyrophosphate transferase | N180_18370 | Not Available | Negative | 3876928 - 3877848 | 34496.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

