Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_11040 | Not Available | Negative | 370046 - 370315 | 10477.6 |
| hypothetical protein | N180_11050 | Not Available | Negative | 370913 - 371425 | 19639.1 |
| hypothetical protein | N180_11055 | Not Available | Negative | 371422 - 372639 | 46087.9 |
| ribokinase | N180_11060 | Not Available | Negative | 373250 - 374161 | 33023.2 |
| hypothetical protein | N180_11065 | Not Available | Negative | 374224 - 374691 | 17926.4 |
| cysteine synthase | N180_11075 | Not Available | Negative | 377206 - 378087 | 31995.1 |
| serine acetyltransferase | N180_11080 | Not Available | Negative | 378098 - 378901 | 29797.8 |
| mechanosensitive ion channel protein mscs | N180_11085 | Not Available | Negative | 378924 - 379757 | 30343.4 |
| dna helicase | N180_11090 | Not Available | Negative | 379790 - 381685 | 70105.9 |
| hypothetical protein | N180_11095 | Not Available | Positive | 381772 - 382680 | 33772.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

