Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit alpha | N180_12320 | Not Available | Negative | 3822661 - 3824751 | 79961.8 |
| ribonucleotide reductase | N180_12325 | Not Available | Negative | 3824756 - 3825118 | 13743.3 |
| glutaredoxin | N180_12330 | Not Available | Negative | 3825143 - 3825385 | 9069.97 |
| fe-s oxidoreductase | N180_12335 | Not Available | Negative | 3825700 - 3826437 | 27396.7 |
| mfs transporter permease | N180_12340 | Not Available | Negative | 3826461 - 3827780 | 49189.8 |
| hypothetical protein | N180_12345 | Not Available | Negative | 3827802 - 3828512 | 25471.9 |
| dna-binding protein | N180_12355 | Not Available | Negative | 3830463 - 3831653 | 43546.4 |
| phosphoribosylaminoimidazole carboxylase | N180_12360 | Not Available | Positive | 3831713 - 3832852 | 42551.4 |
| n5-carboxyaminoimidazole ribonucleotide mutase | N180_12365 | Not Available | Positive | 3832852 - 3833343 | 17213.0 |
| hypothetical protein | N180_12370 | Not Available | Negative | 3833344 - 3833907 | 21125.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

