Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_12265 | Not Available | Positive | 3813111 - 3813512 | 15551.4 |
| methionine aminopeptidase | N180_12270 | Not Available | Negative | 3813538 - 3814338 | 29280.1 |
| beta-lactamase | N180_12275 | Not Available | Positive | 3814667 - 3815764 | 41384.8 |
| arac family transcriptional regulator | N180_12280 | Not Available | Positive | 3815777 - 3816571 | 30477.6 |
| hypothetical protein | N180_12285 | Not Available | Positive | 3816736 - 3817188 | 17232.1 |
| porin | N180_12290 | Not Available | Positive | 3817295 - 3818002 | 24023.7 |
| diguanylate cyclase | N180_12300 | Not Available | Negative | 3819778 - 3820248 | 16917.3 |
| hypothetical protein | N180_12305 | Not Available | Positive | 3820361 - 3820612 | 9737.72 |
| hypothetical protein | N180_12310 | Not Available | Positive | 3820948 - 3821586 | 23319.4 |
| ribonucleotide-diphosphate reductase | N180_12315 | Not Available | Negative | 3821646 - 3822632 | 37663.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

