Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_04895 | Not Available | Negative | 3802625 - 3802861 | 8658.44 |
| toxin hipa | N180_04900 | Not Available | Negative | 3803027 - 3804313 | 48695.2 |
| hypothetical protein | N180_04905 | Not Available | Negative | 3804313 - 3804660 | 13353.3 |
| hypothetical protein | N180_12225 | Not Available | Negative | 3805032 - 3805505 | 17757.2 |
| hypothetical protein | N180_12230 | Not Available | Positive | 3805600 - 3805779 | 6894.06 |
| cardiolipin synthetase | N180_12235 | Not Available | Negative | 3805784 - 3807235 | 55655.7 |
| hypothetical protein | N180_12240 | Not Available | Positive | 3807369 - 3807740 | 13834.7 |
| aminotransferase class iii | N180_12245 | Not Available | Negative | 3807725 - 3808921 | 43789.2 |
| muconate cycloisomerase | N180_12255 | Not Available | Negative | 3810290 - 3811420 | 41589.8 |
| anhydro-n-acetylmuramic acid kinase | N180_12260 | Not Available | Negative | 3811451 - 3812644 | 42892.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

