Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c4 | N180_04735 | Not Available | Positive | 3767887 - 3769026 | 41922.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | N180_04740 | Not Available | Positive | 3769039 - 3770310 | 45913.2 |
| chorismate synthase | N180_04745 | Not Available | Positive | 3770310 - 3771398 | 38730.5 |
| transketolase | N180_04750 | Not Available | Negative | 3771439 - 3773862 | 89908.9 |
| hypothetical protein | N180_04755 | Not Available | Positive | 3774050 - 3774436 | 13751.8 |
| aspartate aminotransferase | N180_04760 | Not Available | Positive | 3774502 - 3775692 | 44046.7 |
| hypothetical protein | N180_04765 | Not Available | Positive | 3775736 - 3776176 | 16588.6 |
| cyclic nucleotide-binding protein | N180_04770 | Not Available | Positive | 3776611 - 3777171 | 21618.2 |
| alpha-glucosidase | N180_04780 | Not Available | Positive | 3778631 - 3780589 | 73259.5 |
| glycoside hydrolase | N180_04785 | Not Available | Positive | 3780619 - 3782538 | 73157.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

