Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol acetyltransferase | N180_04680 | Not Available | Negative | 3758856 - 3759506 | 25450.3 |
| Trna-met | Not Available | Not Available | Positive | 3760492 - 3760568 | Not Available |
| haloacid dehalogenase | N180_04695 | Not Available | Positive | 3760634 - 3761272 | 24169.7 |
| membrane protein | N180_04700 | Not Available | Positive | 3761274 - 3761600 | 12499.3 |
| catalase | N180_04705 | Not Available | Positive | 3761693 - 3763201 | 57530.6 |
| proline dehydrogenase | N180_04710 | Not Available | Negative | 3763279 - 3764469 | 45003.2 |
| rna-binding protein s4 | N180_04715 | Not Available | Positive | 3764560 - 3764766 | 7657.48 |
| 3-dehydroquinate synthase | N180_04720 | Not Available | Positive | 3764766 - 3765833 | 39870.7 |
| sterol desaturase | N180_04725 | Not Available | Positive | 3765823 - 3766725 | 35344.7 |
| prephenate dehydratase | N180_04730 | Not Available | Positive | 3766992 - 3767825 | 31310.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

