Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding protein susd | N180_10980 | Not Available | Negative | 352971 - 354569 | 59411.3 |
| tonb-dependent receptor | N180_10985 | Not Available | Negative | 354594 - 357716 | 113010.0 |
| histidine kinase | N180_10995 | Not Available | Negative | 360724 - 364845 | 156148.0 |
| hypothetical protein | N180_11000 | Not Available | Positive | 364981 - 365226 | 9614.6 |
| hypothetical protein | N180_11005 | Not Available | Positive | 365233 - 365460 | 8620.2 |
| dienelactone hydrolase | N180_11010 | Not Available | Negative | 365536 - 366849 | 48261.2 |
| hypothetical protein | N180_11015 | Not Available | Positive | 367132 - 367836 | 27526.1 |
| hypothetical protein | N180_11020 | Not Available | Positive | 367846 - 368670 | 31527.2 |
| hypothetical protein | N180_11025 | Not Available | Positive | 368796 - 369380 | 21610.5 |
| hypothetical protein | N180_11035 | Not Available | Negative | 369595 - 370083 | 18885.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

