Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_04295 | Not Available | Negative | 3662753 - 3663337 | 20362.5 |
| membrane protein | N180_04300 | Not Available | Positive | 3663719 - 3664351 | 24216.1 |
| acyl-coa dehydrogenase | N180_04305 | Not Available | Positive | 3664344 - 3665432 | 40223.4 |
| xylose isomerase | N180_04310 | Not Available | Negative | 3665491 - 3666468 | 36311.5 |
| beta-n-acetylhexosaminidase | N180_04315 | Not Available | Negative | 3666581 - 3668179 | 60622.9 |
| hypothetical protein | N180_04320 | Not Available | Positive | 3668315 - 3668842 | 19427.6 |
| hypothetical protein | N180_04325 | Not Available | Positive | 3668879 - 3669451 | 21263.2 |
| hypothetical protein | N180_04330 | Not Available | Positive | 3669453 - 3670118 | 26361.2 |
| hypothetical protein | N180_04335 | Not Available | Positive | 3670085 - 3670870 | 29022.6 |
| ligand-binding protein sh3 | N180_04340 | Not Available | Positive | 3670882 - 3671538 | 24813.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

