Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_04240 | Not Available | Negative | 3648913 - 3649340 | 16544.0 |
| hypothetical protein | N180_04245 | Not Available | Negative | 3649387 - 3651843 | 90524.4 |
| arac family transcriptional regulator | N180_04250 | Not Available | Negative | 3651907 - 3652839 | 35430.9 |
| aldehyde dehydrogenase | N180_04255 | Not Available | Positive | 3652940 - 3654445 | 55383.5 |
| udp-glucose 4-epimerase | N180_04260 | Not Available | Positive | 3654521 - 3654895 | 13615.1 |
| hypothetical protein | N180_04265 | Not Available | Positive | 3654975 - 3655175 | 7416.84 |
| gmc family oxidoreductase | N180_04270 | Not Available | Positive | 3655572 - 3657311 | 63935.1 |
| transcriptional initiation protein tat | N180_04275 | Not Available | Positive | 3657350 - 3657976 | 23096.7 |
| hypothetical protein | N180_04280 | Not Available | Positive | 3658035 - 3659822 | 67781.0 |
| rok family transcriptional regulator | N180_04290 | Not Available | Positive | 3661396 - 3662667 | 46393.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

