Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | N180_18185 | Not Available | Positive | 3596548 - 3598443 | 72173.2 |
| histidine kinase | N180_18190 | Not Available | Positive | 3598450 - 3600117 | 64287.8 |
| response regulator | N180_18195 | Not Available | Positive | 3600122 - 3600811 | 26549.4 |
| dna mismatch repair protein mutt | N180_18200 | Not Available | Negative | 3600944 - 3602221 | 47701.4 |
| magnesium chelatase | N180_18205 | Not Available | Negative | 3602226 - 3603716 | 55924.4 |
| von willebrand factor a | N180_18210 | Not Available | Negative | 3603731 - 3604825 | 41170.3 |
| cupin | N180_18215 | Not Available | Negative | 3604912 - 3605793 | 33611.5 |
| cupin | N180_18220 | Not Available | Negative | 3605874 - 3606755 | 34573.5 |
| coproporphyrinogen iii oxidase | N180_18225 | Not Available | Negative | 3606949 - 3608097 | 43448.7 |
| laci family transcriptional regulator | N180_18230 | Not Available | Negative | 3608204 - 3609217 | 37418.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

