Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_16140 | Not Available | Negative | 340593 - 342047 | 54850.5 |
| transcriptional regulator | N180_16145 | Not Available | Negative | 342059 - 342445 | 14663.6 |
| phosphopantothenoylcysteine decarboxylase | N180_16150 | Not Available | Negative | 342611 - 343813 | 43185.4 |
| rna polymerase rpb6 | N180_16155 | Not Available | Negative | 343862 - 344191 | 12603.8 |
| lipoprotein | N180_16160 | Not Available | Negative | 344188 - 345120 | 36247.8 |
| polyisoprenoid-binding protein | N180_10955 | Not Available | Positive | 345503 - 346084 | 21000.9 |
| peptidase m13 | N180_10960 | Not Available | Negative | 346087 - 348198 | 77975.4 |
| hypothetical protein | N180_10965 | Not Available | Negative | 348422 - 348943 | 19427.6 |
| glycoside hydrolase | N180_10970 | Not Available | Negative | 349058 - 351484 | 90450.4 |
| hypothetical protein | N180_10975 | Not Available | Negative | 351548 - 352981 | 52406.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

