Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde oxidase | N180_19225 | Not Available | Negative | 3586712 - 3587695 | 36226.3 |
| transcriptional regulator | N180_19230 | Not Available | Positive | 3587900 - 3588796 | 34553.0 |
| Trna-his | Not Available | Not Available | Positive | 3588930 - 3589005 | Not Available |
| beta-xylosidase | N180_19240 | Not Available | Negative | 3589127 - 3590641 | 56422.6 |
| Trna-his | Not Available | Not Available | Positive | 3590818 - 3590894 | Not Available |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | N180_19255 | Not Available | Positive | 3591331 - 3591900 | 20992.3 |
| 2-methylthioadenine synthetase | N180_19260 | Not Available | Positive | 3592021 - 3593343 | 49484.3 |
| diacylglyceryl transferase | N180_19265 | Not Available | Positive | 3593364 - 3594515 | 42810.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | N180_18175 | Not Available | Negative | 3595437 - 3595991 | 20900.6 |
| hypothetical protein | N180_18180 | Not Available | Negative | 3595996 - 3596298 | 11669.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

