Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 1 | N180_19605 | Not Available | Positive | 3527638 - 3528855 | 45885.7 |
| hypothetical protein | N180_19610 | Not Available | Negative | 3528876 - 3529823 | 37329.4 |
| arac family transcriptional regulator | N180_19615 | Not Available | Negative | 3529901 - 3530722 | 30606.7 |
| fis family transcriptional regulator | N180_18410 | Not Available | Negative | 3530759 - 3532162 | 52514.0 |
| copper oxidase | N180_18415 | Not Available | Negative | 3532634 - 3533053 | 15580.9 |
| electron transporter | N180_18420 | Not Available | Negative | 3533057 - 3533707 | 25090.1 |
| 3-oxoacyl-acp synthase | N180_18425 | Not Available | Positive | 3533807 - 3534808 | 36574.5 |
| hypothetical protein | N180_18430 | Not Available | Positive | 3534811 - 3535245 | 16423.9 |
| electron transporter | N180_18435 | Not Available | Positive | 3535245 - 3535862 | 23597.4 |
| superoxide dismutase | N180_18440 | Not Available | Positive | 3535961 - 3536635 | 25103.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

