Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna delta(2)-isopentenylpyrophosphate transferase | N180_20545 | Not Available | Positive | 3492923 - 3493855 | 35308.9 |
| hypothetical protein | N180_20550 | Not Available | Positive | 3494071 - 3494601 | 18582.2 |
| acyl-coa dehydrogenase | N180_20780 | Not Available | Negative | 3495196 - 3496368 | 42397.9 |
| adenine phosphoribosyltransferase | N180_20785 | Not Available | Negative | 3496529 - 3497056 | 19296.8 |
| hypothetical protein | N180_20790 | Not Available | Negative | 3497049 - 3497948 | 34468.6 |
| hemolysin | N180_20795 | Not Available | Positive | 3498027 - 3499778 | 66616.2 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | N180_20205 | Not Available | Negative | 3499819 - 3500664 | 31267.0 |
| fructose-bisphosphate aldolase | N180_20210 | Not Available | Positive | 3500818 - 3501897 | 39606.8 |
| membrane protein | N180_20215 | Not Available | Positive | 3502047 - 3502532 | 18157.9 |
| gnat family acetyltransferase | N180_20220 | Not Available | Positive | 3502516 - 3502932 | 15436.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

