Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose-6-phosphate synthase | N180_16075 | Not Available | Positive | 322583 - 324772 | 84213.1 |
| glycosyl hydrolase | N180_16080 | Not Available | Negative | 324857 - 326638 | 68898.5 |
| hypothetical protein | N180_16085 | Not Available | Positive | 326788 - 327006 | 8652.79 |
| hypothetical protein | N180_16095 | Not Available | Positive | 328391 - 328639 | 9277.28 |
| hypothetical protein | N180_16100 | Not Available | Positive | 328663 - 331350 | 100154.0 |
| abc transporter atp-binding protein | N180_16105 | Not Available | Negative | 331356 - 333035 | 62924.0 |
| radical sam protein | N180_16115 | Not Available | Negative | 336139 - 337242 | 41080.1 |
| hypothetical protein | N180_16120 | Not Available | Negative | 337303 - 338526 | 45945.6 |
| dna repair protein | N180_16125 | Not Available | Negative | 338562 - 340229 | 61799.2 |
| hypothetical protein | N180_16135 | Not Available | Negative | 340352 - 340645 | 11461.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

