Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_20290 | Not Available | Negative | 3481281 - 3482261 | 37166.1 |
| hypothetical protein | N180_20295 | Not Available | Negative | 3482868 - 3483164 | 10232.3 |
| hypothetical protein | N180_20300 | Not Available | Negative | 3483188 - 3484783 | 59933.1 |
| hypothetical protein | N180_20305 | Not Available | Negative | 3485104 - 3486135 | 40751.2 |
| deacetylase | N180_20515 | Not Available | Positive | 3486771 - 3487676 | 33698.6 |
| dna topoisomerase i | N180_20520 | Not Available | Positive | 3487803 - 3489662 | 69232.4 |
| hypothetical protein | N180_20525 | Not Available | Negative | 3489684 - 3490541 | 31827.4 |
| beta-lactamase | N180_20530 | Not Available | Positive | 3490541 - 3491737 | 45497.4 |
| hypothetical protein | N180_20535 | Not Available | Positive | 3491774 - 3492106 | 12629.9 |
| hypothetical protein | N180_20540 | Not Available | Positive | 3492097 - 3492933 | 31437.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

