Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_19390 | Not Available | Negative | 3465065 - 3465292 | 8253.96 |
| thiol:disulfide interchange protein dsbd | N180_19395 | Not Available | Positive | 3465421 - 3467148 | 62831.5 |
| 6-phosphofructokinase | N180_19400 | Not Available | Positive | 3467155 - 3468138 | 35226.5 |
| hypothetical protein | N180_19405 | Not Available | Negative | 3468215 - 3468535 | 11111.5 |
| 5'-3'-deoxyribonucleotidase | N180_19410 | Not Available | Negative | 3468577 - 3469116 | 21182.1 |
| 16s rrna processing protein rimm | N180_19420 | Not Available | Positive | 3469892 - 3470419 | 20314.2 |
| trna (guanine-n1)-methyltransferase | N180_19425 | Not Available | Positive | 3470424 - 3471101 | 25080.0 |
| hypothetical protein | N180_19430 | Not Available | Positive | 3471236 - 3471499 | 10225.5 |
| 50s ribosomal protein l19 | N180_19435 | Not Available | Positive | 3471661 - 3472008 | 13133.1 |
| hypothetical protein | N180_20855 | Not Available | Positive | 3472274 - 3472498 | 8289.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

