Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 3453904 - 3453979 | Not Available |
| hypothetical protein | N180_19340 | Not Available | Positive | 3454049 - 3455783 | 64823.5 |
| hypothetical protein | N180_19345 | Not Available | Positive | 3456042 - 3456788 | 28609.1 |
| hypothetical protein | N180_19355 | Not Available | Negative | 3458402 - 3459244 | 30584.0 |
| 3-oxoacyl-acp synthase | N180_19360 | Not Available | Negative | 3459305 - 3460387 | 39541.6 |
| hypothetical protein | N180_19365 | Not Available | Negative | 3460452 - 3461096 | 24562.7 |
| peptidase m41 | N180_19370 | Not Available | Negative | 3461159 - 3463249 | 76885.5 |
| iojap family protein | N180_19375 | Not Available | Negative | 3463282 - 3463713 | 16385.3 |
| biotin biosynthesis protein bioc | N180_19380 | Not Available | Positive | 3463700 - 3464479 | 28721.6 |
| sugar transporter | N180_19385 | Not Available | Positive | 3464505 - 3464954 | 16716.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

