Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_13670 | Not Available | Negative | 3388785 - 3389645 | 31836.3 |
| hypothetical protein | N180_20900 | Not Available | Negative | 3389698 - 3390164 | 17545.3 |
| starch synthase | N180_20905 | Not Available | Positive | 3390316 - 3391140 | 31753.1 |
| hypothetical protein | N180_20910 | Not Available | Positive | 3391163 - 3392584 | 51404.1 |
| translation initiation factor if-2 | N180_20435 | Not Available | Negative | 3393057 - 3396095 | 109401.0 |
| transcription elongation factor nusa | N180_20440 | Not Available | Negative | 3396318 - 3397553 | 46768.8 |
| hypothetical protein | N180_20445 | Not Available | Negative | 3397555 - 3398019 | 17378.0 |
| hypothetical protein | N180_20450 | Not Available | Negative | 3398207 - 3398632 | 15698.0 |
| membrane protein | N180_20455 | Not Available | Positive | 3398651 - 3398998 | 12006.6 |
| acyl-coa dehydrogenase | N180_20460 | Not Available | Negative | 3399262 - 3400401 | 41478.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

