Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | N180_16025 | Not Available | Positive | 310201 - 311364 | 44366.6 |
| membrane protein | N180_16030 | Not Available | Negative | 311388 - 311954 | 20599.3 |
| amino acid transporter | N180_16035 | Not Available | Negative | 312044 - 313528 | 53304.0 |
| inorganic pyrophosphatase | N180_16040 | Not Available | Negative | 313661 - 315913 | 78605.8 |
| amino acid transporter | N180_16045 | Not Available | Positive | 316067 - 317485 | 51088.3 |
| radical sam protein | N180_16050 | Not Available | Positive | 317602 - 318567 | 36578.9 |
| srpbcc domain-containing protein | N180_16055 | Not Available | Negative | 318572 - 319048 | 18331.3 |
| ammonia channel protein | N180_16060 | Not Available | Positive | 319371 - 320750 | 48718.1 |
| hypothetical protein | N180_16065 | Not Available | Positive | 320805 - 321848 | 37292.6 |
| hypothetical protein | N180_16070 | Not Available | Negative | 321896 - 322369 | 17892.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

