Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | N180_13565 | Not Available | Negative | 3362204 - 3363355 | 43243.7 |
| hypothetical protein | N180_13570 | Not Available | Negative | 3363384 - 3363926 | 20529.9 |
| dihydropteroate synthase | N180_13575 | Not Available | Positive | 3363983 - 3364840 | 31107.0 |
| membrane protein | N180_13580 | Not Available | Positive | 3364870 - 3365661 | 29794.8 |
| hypothetical protein | N180_13585 | Not Available | Negative | 3365779 - 3366189 | 14774.8 |
| hypothetical protein | N180_13590 | Not Available | Negative | 3366376 - 3366942 | 21587.9 |
| adenosylhomocysteinase | N180_13595 | Not Available | Positive | 3367114 - 3368430 | 48148.7 |
| pyridoxamine 5'-phosphate oxidase | N180_13600 | Not Available | Positive | 3368790 - 3369509 | 26322.4 |
| glycine dehydrogenase | N180_13605 | Not Available | Positive | 3369582 - 3372467 | 105192.0 |
| response regulator | N180_13610 | Not Available | Positive | 3372614 - 3372997 | 14600.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

