Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | N180_13515 | Not Available | Positive | 3351830 - 3352531 | 26201.9 |
| major facilitator transporter | N180_13520 | Not Available | Positive | 3352560 - 3353801 | 45368.2 |
| hydroxypyruvate isomerase | N180_13525 | Not Available | Positive | 3353803 - 3354687 | 32772.3 |
| xylose isomerase | N180_13530 | Not Available | Positive | 3354697 - 3355566 | 31880.9 |
| aspartate-semialdehyde dehydrogenase | N180_13535 | Not Available | Positive | 3355878 - 3356870 | 36252.0 |
| d-alanyl-d-alanine carboxypeptidase | N180_13540 | Not Available | Positive | 3356981 - 3358393 | 50998.8 |
| beta-n-acetylhexosaminidase | N180_13545 | Not Available | Positive | 3358511 - 3360412 | 71358.2 |
| pseudouridine synthase | N180_13550 | Not Available | Positive | 3360417 - 3361226 | 31429.0 |
| thioesterase | N180_13555 | Not Available | Positive | 3361291 - 3361689 | 14825.8 |
| shikimate kinase | N180_13560 | Not Available | Negative | 3361686 - 3362192 | 18744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

