Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | N180_14125 | Not Available | Positive | 3340210 - 3341013 | 30471.9 |
| hypothetical protein | N180_13470 | Not Available | Positive | 3341641 - 3342993 | 50963.2 |
| transcriptional regulator | N180_13475 | Not Available | Negative | 3343288 - 3344013 | 27270.1 |
| nad-dependent epimerase | N180_13480 | Not Available | Negative | 3344031 - 3344978 | 35451.2 |
| twin-arginine translocation pathway signal protein | N180_13485 | Not Available | Positive | 3345256 - 3345864 | 22213.6 |
| gmc family oxidoreductase | N180_13490 | Not Available | Positive | 3345884 - 3347584 | 63586.0 |
| oxidoreductase | N180_13495 | Not Available | Positive | 3347584 - 3348744 | 42236.5 |
| ap endonuclease | N180_13500 | Not Available | Positive | 3348749 - 3349810 | 39964.0 |
| cytochrome c552 | N180_13505 | Not Available | Positive | 3349924 - 3350322 | 13903.6 |
| oxidoreductase | N180_13510 | Not Available | Positive | 3350360 - 3351817 | 53618.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

