Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | N180_13975 | Not Available | Positive | 3307237 - 3307596 | 13275.1 |
| pilb | N180_13980 | Not Available | Positive | 3307797 - 3308255 | 17284.1 |
| gluconolactonase | N180_13985 | Not Available | Negative | 3308321 - 3309163 | 31151.8 |
| membrane protein | N180_13990 | Not Available | Negative | 3309321 - 3309881 | 20426.4 |
| hypothetical protein | N180_13995 | Not Available | Negative | 3309962 - 3310807 | 32371.2 |
| hypothetical protein | N180_14000 | Not Available | Positive | 3311163 - 3311780 | 23717.9 |
| fe-s oxidoreductase | N180_14005 | Not Available | Negative | 3311794 - 3313992 | 83832.4 |
| hypothetical protein | N180_14010 | Not Available | Negative | 3314143 - 3315303 | 43601.7 |
| hypothetical protein | N180_14015 | Not Available | Positive | 3315571 - 3316638 | 40430.9 |
| arac family transcriptional regulator | N180_14020 | Not Available | Positive | 3316723 - 3317580 | 32799.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

