Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | N180_18145 | Not Available | Negative | 3264830 - 3266008 | 41558.2 |
| marr family transcriptional regulator | N180_18155 | Not Available | Negative | 3268473 - 3268931 | 17215.8 |
| membrane protein | N180_18160 | Not Available | Negative | 3269090 - 3270406 | 46971.6 |
| amp-dependent synthetase | N180_18165 | Not Available | Negative | 3270528 - 3272315 | 67123.0 |
| hypothetical protein | N180_18170 | Not Available | Positive | 3272587 - 3273066 | 17312.7 |
| hypothetical protein | N180_19100 | Not Available | Positive | 3274876 - 3275780 | 34443.9 |
| hypothetical protein | N180_19105 | Not Available | Negative | 3275794 - 3278313 | 98249.8 |
| hypothetical protein | N180_19110 | Not Available | Positive | 3278721 - 3278918 | 7691.25 |
| hypothetical protein | N180_19115 | Not Available | Positive | 3279106 - 3279597 | 18041.4 |
| n-acetylglucosamine kinase | N180_19120 | Not Available | Negative | 3279604 - 3280458 | 32235.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

