Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_19005 | Not Available | Positive | 3251205 - 3251516 | 11938.5 |
| membrane protein | N180_18095 | Not Available | Negative | 3251598 - 3252488 | 33754.9 |
| 2-oxoglutarate dehydrogenase | N180_18100 | Not Available | Negative | 3252700 - 3253926 | 43135.1 |
| 2-oxoglutarate dehydrogenase | N180_18105 | Not Available | Negative | 3253946 - 3256741 | 105062.0 |
| merr family transcriptional regulator | N180_18110 | Not Available | Negative | 3256796 - 3257674 | 33365.8 |
| deoxyribodipyrimidine photolyase | N180_18115 | Not Available | Negative | 3257757 - 3259004 | 47209.7 |
| hypothetical protein | N180_18120 | Not Available | Positive | 3259168 - 3260082 | 33462.6 |
| hypothetical protein | N180_18130 | Not Available | Negative | 3261456 - 3262358 | 33099.5 |
| hypothetical protein | N180_18135 | Not Available | Negative | 3262366 - 3262896 | 19724.2 |
| acyl-coa dehydrogenase | N180_18140 | Not Available | Negative | 3263035 - 3264825 | 65790.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

