Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-d-glucoside glucohydrolase | N180_18630 | Not Available | Positive | 296106 - 298400 | 83884.0 |
| membrane protein | N180_18635 | Not Available | Positive | 298765 - 301983 | 116840.0 |
| membrane protein | N180_18640 | Not Available | Positive | 302106 - 303821 | 62347.7 |
| phospholipase | N180_18645 | Not Available | Positive | 303904 - 304716 | 30511.6 |
| hypothetical protein | N180_21060 | Not Available | Negative | 304784 - 305596 | 31150.8 |
| hypothetical protein | N180_21065 | Not Available | Negative | 305707 - 306084 | 14086.0 |
| lysine transporter lyse | N180_16005 | Not Available | Negative | 306184 - 306810 | 23375.7 |
| cytidine deaminase | N180_16010 | Not Available | Positive | 307061 - 307480 | 14976.8 |
| gmp synthase | N180_16015 | Not Available | Positive | 307489 - 309018 | 56444.5 |
| hypothetical protein | N180_16020 | Not Available | Positive | 309005 - 310204 | 45105.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

