Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | N180_09915 | Not Available | Negative | 3224570 - 3225931 | 49860.3 |
| glcnac-pi de-n-acetylase | N180_09920 | Not Available | Negative | 3225979 - 3226698 | 26746.9 |
| glutathione peroxidase | N180_09925 | Not Available | Negative | 3226740 - 3227237 | 18945.7 |
| hypothetical protein | N180_09930 | Not Available | Negative | 3227241 - 3227867 | 24236.4 |
| mfs transporter | N180_09935 | Not Available | Positive | 3227978 - 3230185 | 83571.1 |
| fur family transcriptional regulator | N180_09940 | Not Available | Positive | 3230249 - 3230740 | 19198.9 |
| adenylosuccinate synthetase | N180_09945 | Not Available | Positive | 3230780 - 3231882 | 40494.6 |
| peptidylprolyl isomerase | N180_18935 | Not Available | Negative | 3231932 - 3232432 | 17975.9 |
| glycoside hydrolase | N180_18940 | Not Available | Negative | 3232865 - 3233776 | 34993.6 |
| hypothetical protein | N180_18945 | Not Available | Negative | 3233844 - 3235214 | 50444.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

