Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | N180_09865 | Not Available | Positive | 3216452 - 3217189 | 26976.0 |
| hypothetical protein | N180_09870 | Not Available | Negative | 3217218 - 3217898 | 26460.4 |
| l-lysine 6-aminotransferase | N180_09875 | Not Available | Positive | 3218110 - 3219441 | 50239.0 |
| hypothetical protein | N180_09880 | Not Available | Positive | 3219445 - 3219858 | 15434.5 |
| hypothetical protein | N180_09885 | Not Available | Positive | 3220032 - 3220328 | 11530.3 |
| hypothetical protein | N180_09890 | Not Available | Positive | 3220641 - 3221099 | 17221.2 |
| hypothetical protein | N180_09895 | Not Available | Negative | 3221256 - 3221705 | 16878.3 |
| hypothetical protein | N180_09900 | Not Available | Positive | 3222215 - 3222682 | 17232.8 |
| hypothetical protein | N180_09905 | Not Available | Positive | 3222737 - 3223141 | 15436.4 |
| hypothetical protein | N180_09910 | Not Available | Negative | 3223298 - 3224431 | 41088.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

