Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | N180_09595 | Not Available | Negative | 3161556 - 3162581 | 39041.3 |
| restriction endonuclease ecori subunit r | N180_09600 | Not Available | Positive | 3162638 - 3163099 | 18255.2 |
| hypothetical protein | N180_09605 | Not Available | Negative | 3163201 - 3163908 | 26234.4 |
| hypothetical protein | N180_09610 | Not Available | Negative | 3163935 - 3164576 | 23118.3 |
| valyl-trna synthetase | N180_09615 | Not Available | Negative | 3164830 - 3167493 | 101707.0 |
| gnat family acetyltransferase | N180_09620 | Not Available | Negative | 3167541 - 3168086 | 20929.4 |
| peptidase m13 | N180_09625 | Not Available | Positive | 3168495 - 3170537 | 76233.6 |
| ompw family protein | N180_09630 | Not Available | Negative | 3170583 - 3171272 | 25149.3 |
| hypothetical protein | N180_09635 | Not Available | Negative | 3171358 - 3171699 | 13104.9 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | N180_09640 | Not Available | Positive | 3171748 - 3172419 | 25505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

