Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | N180_20970 | Not Available | Negative | 3150884 - 3151978 | 40592.1 |
| peptidoglycan transglycosylase | N180_20975 | Not Available | Positive | 3152080 - 3152832 | 28499.9 |
| hypothetical protein | N180_09545 | Not Available | Negative | 3153069 - 3154599 | 58803.6 |
| rna methyltransferase | N180_09550 | Not Available | Positive | 3154590 - 3155339 | 27586.7 |
| Trna-cys | Not Available | Not Available | Positive | 3155388 - 3155458 | Not Available |
| dihydroorotate dehydrogenase | N180_09570 | Not Available | Negative | 3155769 - 3156797 | 37876.0 |
| abc transporter atp-binding protein | N180_09575 | Not Available | Positive | 3156953 - 3158869 | 72562.5 |
| alpha-amylase | N180_09580 | Not Available | Negative | 3158899 - 3160386 | 57190.0 |
| thioesterase | N180_09585 | Not Available | Positive | 3160469 - 3160990 | 19398.3 |
| ubiquinol-cytochrome c reductase | N180_09590 | Not Available | Negative | 3161052 - 3161456 | 15690.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

