Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel protein mscs | N180_16350 | Not Available | Positive | 3136818 - 3138110 | 48916.0 |
| peptidase m1 | N180_16355 | Not Available | Negative | 3138167 - 3140134 | 74173.5 |
| hypothetical protein | N180_16360 | Not Available | Negative | 3140161 - 3140898 | 27581.4 |
| arsc family transcriptional regulator | N180_16365 | Not Available | Negative | 3140953 - 3141300 | 12915.5 |
| hypothetical protein | N180_16370 | Not Available | Positive | 3141425 - 3142939 | 58316.6 |
| regulator | N180_16375 | Not Available | Positive | 3142943 - 3143626 | 25761.3 |
| chemotaxis protein cher | N180_16385 | Not Available | Positive | 3147254 - 3148090 | 32201.4 |
| histidine kinase | N180_16390 | Not Available | Positive | 3148125 - 3149711 | 58988.8 |
| peptidyl-trna hydrolase | N180_16395 | Not Available | Negative | 3149712 - 3150272 | 20591.0 |
| hypothetical protein | N180_20965 | Not Available | Negative | 3150494 - 3150787 | 11121.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

