Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | N180_16295 | Not Available | Negative | 3128481 - 3129305 | 29845.2 |
| 50s ribosomal protein l23 | N180_16300 | Not Available | Negative | 3129329 - 3129619 | 10705.3 |
| 50s ribosomal protein l4 | N180_16305 | Not Available | Negative | 3129621 - 3130250 | 22983.7 |
| 50s ribosomal protein l3 | N180_16310 | Not Available | Negative | 3130255 - 3130872 | 21850.4 |
| 30s ribosomal protein s10 | N180_16315 | Not Available | Positive | 3131274 - 3131882 | 22867.8 |
| 30s ribosomal protein s10 | N180_16320 | Not Available | Negative | 3131947 - 3132252 | 11418.2 |
| elongation factor g | N180_16325 | Not Available | Negative | 3132310 - 3134424 | 77907.3 |
| 30s ribosomal protein s7 | N180_16330 | Not Available | Negative | 3134442 - 3134909 | 17603.6 |
| 30s ribosomal protein s12 | N180_16335 | Not Available | Negative | 3134926 - 3135339 | 15095.5 |
| hypothetical protein | N180_16340 | Not Available | Negative | 3135770 - 3135994 | 8782.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

