Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s11 | N180_16190 | Not Available | Negative | 3118272 - 3118661 | 13802.8 |
| 30s ribosomal protein s13 | N180_16195 | Not Available | Negative | 3118683 - 3119060 | 14093.2 |
| translation initiation factor if-1 | N180_16200 | Not Available | Negative | 3119258 - 3119476 | 8308.24 |
| methionine aminopeptidase | N180_16205 | Not Available | Negative | 3119548 - 3120333 | 28504.1 |
| preprotein translocase subunit secy | N180_16210 | Not Available | Negative | 3120340 - 3121683 | 48525.6 |
| 50s ribosomal protein l15 | N180_16215 | Not Available | Negative | 3121687 - 3122133 | 15639.0 |
| 30s ribosomal protein s5 | N180_16225 | Not Available | Negative | 3122426 - 3122944 | 18024.1 |
| 50s ribosomal protein l18 | N180_16230 | Not Available | Negative | 3122963 - 3123316 | 12644.2 |
| 50s ribosomal protein l6 | N180_16235 | Not Available | Negative | 3123322 - 3123879 | 20131.6 |
| 30s ribosomal protein s8 | N180_16240 | Not Available | Negative | 3123898 - 3124296 | 14569.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

