Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i and ii | N180_17635 | Not Available | Negative | 3104942 - 3105742 | 30271.3 |
| carbohydrate-binding protein susd | N180_17640 | Not Available | Negative | 3105852 - 3107360 | 55835.8 |
| tonb-dependent receptor | N180_17645 | Not Available | Negative | 3107376 - 3110405 | 108534.0 |
| hypothetical protein | N180_17650 | Not Available | Positive | 3110881 - 3111450 | 21825.5 |
| hypothetical protein | N180_17655 | Not Available | Positive | 3111579 - 3112355 | 28237.4 |
| molecular chaperone dnak | N180_16165 | Not Available | Negative | 3112534 - 3114450 | 68382.8 |
| methyltransferase | N180_16170 | Not Available | Negative | 3114627 - 3115817 | 44112.4 |
| 50s ribosomal protein l17 | N180_16175 | Not Available | Negative | 3115894 - 3116439 | 20169.0 |
| dna-directed rna polymerase subunit alpha | N180_16180 | Not Available | Negative | 3116524 - 3117516 | 37182.9 |
| 30s ribosomal protein s4 | N180_16185 | Not Available | Negative | 3117598 - 3118206 | 23032.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

