Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_20690 | Not Available | Negative | 3082117 - 3082512 | 14770.7 |
| phosphoglyceromutase | N180_20695 | Not Available | Positive | 3082649 - 3084169 | 55219.5 |
| hypothetical protein | N180_20700 | Not Available | Positive | 3084169 - 3084708 | 20391.6 |
| hypothetical protein | N180_17545 | Not Available | Positive | 3086328 - 3086699 | 13739.8 |
| short-chain dehydrogenase | N180_17550 | Not Available | Negative | 3086707 - 3087495 | 28160.8 |
| ureidoglycolate lyase | N180_17555 | Not Available | Negative | 3087506 - 3088375 | 31524.5 |
| short-chain dehydrogenase | N180_17560 | Not Available | Negative | 3088384 - 3089148 | 27049.5 |
| altronate hydrolase | N180_17565 | Not Available | Negative | 3089158 - 3090807 | 59076.7 |
| hypothetical protein | N180_17570 | Not Available | Negative | 3090804 - 3091142 | 13257.2 |
| transcriptional regulator | N180_17575 | Not Available | Positive | 3091272 - 3092171 | 34569.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

