Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dessication-associated protein | N180_19980 | Not Available | Negative | 3069576 - 3070412 | 29678.4 |
| tat (twin-arginine translocation) pathway signal sequence containing protein | N180_19985 | Not Available | Negative | 3070423 - 3071133 | 25300.2 |
| response regulator | N180_19990 | Not Available | Positive | 3071280 - 3072059 | 29359.2 |
| diguanylate cyclase | N180_19995 | Not Available | Positive | 3071971 - 3074985 | 114609.0 |
| hypothetical protein | N180_20000 | Not Available | Positive | 3075411 - 3075608 | 7332.06 |
| hypothetical protein | N180_20005 | Not Available | Positive | 3075677 - 3076632 | 36891.1 |
| aminobenzoate synthetase | N180_20670 | Not Available | Positive | 3078388 - 3079659 | 47489.6 |
| peptidase m48 | N180_20675 | Not Available | Negative | 3079698 - 3080525 | 29247.0 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | N180_20680 | Not Available | Negative | 3080569 - 3081222 | 23211.2 |
| nicotinate-nucleotide pyrophosphorylase | N180_20685 | Not Available | Negative | 3081226 - 3082068 | 30571.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

