Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | N180_17730 | Not Available | Negative | 3057114 - 3058292 | 44384.1 |
| abc transporter permease | N180_17735 | Not Available | Negative | 3058320 - 3059561 | 46711.3 |
| macrolide abc transporter atp-binding protein | N180_17740 | Not Available | Negative | 3059570 - 3060235 | 24399.6 |
| membrane protein | N180_17745 | Not Available | Negative | 3060255 - 3061709 | 54955.1 |
| abc transporter permease | N180_17750 | Not Available | Negative | 3061718 - 3062965 | 46030.8 |
| log family protein yvdd | N180_19955 | Not Available | Negative | 3063290 - 3063874 | 21500.1 |
| inosine-5-monophosphate dehydrogenase | N180_19960 | Not Available | Negative | 3063989 - 3065458 | 52327.5 |
| peptidase m16 | N180_19965 | Not Available | Negative | 3065777 - 3067051 | 47787.9 |
| peptidase m16 | N180_19970 | Not Available | Negative | 3067044 - 3068288 | 46769.5 |
| hypothetical protein | N180_19975 | Not Available | Positive | 3068389 - 3069513 | 42274.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

