Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | N180_15240 | Not Available | Positive | 266337 - 267350 | 36255.9 |
| hypothetical protein | N180_15250 | Not Available | Negative | 267868 - 268050 | 6883.88 |
| trna threonylcarbamoyladenosine biosynthesis protein gcp | N180_15255 | Not Available | Negative | 268058 - 269071 | 36494.2 |
| hypothetical protein | N180_15260 | Not Available | Positive | 269149 - 273582 | 164801.0 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | N180_15265 | Not Available | Negative | 273586 - 274797 | 44002.1 |
| permease | N180_15270 | Not Available | Negative | 274935 - 276371 | 53748.7 |
| hypothetical protein | N180_15275 | Not Available | Negative | 276402 - 276782 | 14969.7 |
| Trna-met | Not Available | Not Available | Positive | 276886 - 276962 | Not Available |
| hypothetical protein | N180_15290 | Not Available | Positive | 277739 - 278551 | 31556.5 |
| hypothetical protein | N180_15295 | Not Available | Positive | 278862 - 281789 | 114467.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

