Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_07340 | Not Available | Positive | 3008731 - 3009225 | 19953.5 |
| hypothetical protein | N180_07345 | Not Available | Negative | 3009751 - 3010713 | 36311.3 |
| hypothetical protein | N180_07350 | Not Available | Negative | 3011173 - 3012015 | 31840.0 |
| endoribonuclease l-psp | N180_07355 | Not Available | Negative | 3012094 - 3012555 | 17259.3 |
| arac family transcriptional regulator | N180_07360 | Not Available | Positive | 3012645 - 3013526 | 34208.3 |
| hypothetical protein | N180_07365 | Not Available | Negative | 3013607 - 3014932 | 50213.6 |
| peptidase s9 | N180_07370 | Not Available | Negative | 3015304 - 3017418 | 79957.3 |
| hypothetical protein | N180_07375 | Not Available | Negative | 3017487 - 3018233 | 27947.8 |
| lysr family transcriptional regulator | N180_07380 | Not Available | Negative | 3018926 - 3019792 | 33230.1 |
| cation transporter | N180_07385 | Not Available | Positive | 3020074 - 3020400 | 11491.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

