Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_07185 | Not Available | Negative | 2979055 - 2979678 | 22848.8 |
| hypothetical protein | N180_07190 | Not Available | Negative | 2979734 - 2980306 | 22197.7 |
| transcriptional regulator | N180_07195 | Not Available | Negative | 2980308 - 2980679 | 14275.5 |
| hypothetical protein | N180_07200 | Not Available | Negative | 2980927 - 2981193 | 10158.4 |
| membrane protein | N180_07205 | Not Available | Positive | 2981457 - 2982482 | 39351.3 |
| chemotaxis protein chey | N180_07210 | Not Available | Positive | 2982516 - 2983274 | 28907.9 |
| glycerol acyltransferase | N180_07215 | Not Available | Negative | 2983295 - 2984038 | 28151.9 |
| dna mismatch repair protein mutt | N180_07220 | Not Available | Negative | 2984046 - 2984600 | 20417.3 |
| tonb-dependent receptor | N180_07225 | Not Available | Negative | 2984691 - 2987174 | 91785.6 |
| thioredoxin | N180_07230 | Not Available | Positive | 2987271 - 2987870 | 23131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

