Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease | N180_06970 | Not Available | Negative | 2933386 - 2934309 | 34428.8 |
| capsule biosynthesis protein capa | N180_06975 | Not Available | Negative | 2934382 - 2935524 | 40997.2 |
| glycoside hydrolase | N180_06980 | Not Available | Negative | 2935594 - 2936148 | 20808.9 |
| pyruvate dehydrogenase | N180_06985 | Not Available | Positive | 2936383 - 2937378 | 36988.1 |
| pyruvate dehydrogenase | N180_06990 | Not Available | Positive | 2937411 - 2939057 | 57606.1 |
| histidyl-trna synthase | N180_06995 | Not Available | Positive | 2939130 - 2940533 | 51703.3 |
| dienelactone hydrolase | N180_07000 | Not Available | Negative | 2940530 - 2941300 | 27811.1 |
| dna repair protein | N180_07005 | Not Available | Positive | 2941373 - 2942164 | 30068.5 |
| response regulator | N180_07010 | Not Available | Negative | 2942142 - 2942525 | 14273.3 |
| abc transporter | N180_07015 | Not Available | Negative | 2942618 - 2943928 | 50304.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

