Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | N180_15190 | Not Available | Positive | 255160 - 256023 | 31197.3 |
| riboflavin biosynthesis protein ribf | N180_15195 | Not Available | Positive | 256035 - 256979 | 35755.1 |
| hypothetical protein | N180_15200 | Not Available | Positive | 257029 - 257388 | 14021.0 |
| sodium:proton antiporter | N180_15205 | Not Available | Positive | 257438 - 259666 | 82147.8 |
| membrane protein | N180_15210 | Not Available | Positive | 259745 - 260782 | 40059.1 |
| lysine transporter lyse | N180_15215 | Not Available | Negative | 260843 - 261463 | 23344.1 |
| excinuclease abc subunit a | N180_15220 | Not Available | Negative | 261554 - 264358 | 103927.0 |
| rna polymerase subunit sigma-24 | N180_15225 | Not Available | Positive | 264622 - 265197 | 22451.3 |
| hypothetical protein | N180_15230 | Not Available | Positive | 265290 - 265484 | 7421.66 |
| endonuclease iii | N180_15235 | Not Available | Positive | 265525 - 266214 | 26125.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

